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  • Top cofit genes for CSW01_08905 from Vibrio cholerae E7946 ATCC 55056

    MurR/RpiR family transcriptional regulator
    SEED: Sialic acid utilization regulator, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17365 DNA mismatch repair protein MutT no 0.61
    2 CSW01_19305 M23 family peptidase no 0.60
    3 CSW01_19220 sel1 repeat family protein no 0.60
    4 CSW01_15165 DNA-binding response regulator no 0.59
    5 CSW01_13450 EF-P beta-lysylation protein EpmB no 0.57
    6 CSW01_17000 DUF3332 domain-containing protein no 0.56
    7 CSW01_16180 hypothetical protein no 0.55
    8 CSW01_09815 TetR/AcrR family transcriptional regulator no 0.55
    9 CSW01_10080 4-amino-4-deoxychorismate lyase no 0.54
    10 CSW01_07120 LysE family translocator no 0.54
    11 CSW01_02980 HlyC/CorC family transporter 0.54 0.54
    12 CSW01_15780 hypothetical protein no 0.54
    13 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP no 0.54
    14 CSW01_18970 DUF2850 domain-containing protein no 0.53
    15 CSW01_18150 transcription initiation factor TFIIIB no 0.53
    16 CSW01_08755 DUF1496 domain-containing protein no 0.52
    17 CSW01_01170 hypothetical protein no 0.52
    18 CSW01_09000 transcriptional regulator no 0.52
    19 CSW01_11970 homoserine kinase no 0.52
    20 CSW01_14255 sodium/glutamate symporter no 0.51

    Or look for negative cofitness