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  • Top cofit genes for CSW01_08890 from Vibrio cholerae E7946 ATCC 55056

    YafY family transcriptional regulator
    SEED: FIG01201150: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10670 sigma-54-dependent Fis family transcriptional regulator 0.26 0.63
    2 CSW01_02460 type IV pili twitching motility protein PilT 0.24 0.61
    3 CSW01_10680 flagellar protein FliT no 0.61
    4 CSW01_02110 MSHA biogenesis protein MshJ 0.62 0.61
    5 CSW01_10640 flagellar assembly protein FliH no 0.61
    6 CSW01_10345 flagellar biosynthesis protein FlhF no 0.60
    7 CSW01_09655 SELO family protein no 0.60
    8 CSW01_18890 peptidyl-prolyl cis-trans isomerase no 0.60
    9 CSW01_10665 PAS domain-containing sensor histidine kinase 0.23 0.60
    10 CSW01_10605 flagellar motor switch protein FliN 0.68 0.59
    11 CSW01_11180 flagellar hook-associated protein FlgK no 0.59
    12 CSW01_02175 MSHA biogenesis protein MshP no 0.59
    13 CSW01_04150 RNA methyltransferase no 0.59
    14 CSW01_11175 flagellar hook-associated protein 3 no 0.59
    15 CSW01_12910 peptide-methionine (S)-S-oxide reductase no 0.59
    16 CSW01_12855 thiamine ABC transporter ATP-binding protein no 0.58
    17 CSW01_11265 flagellar basal-body protein no 0.58
    18 CSW01_10635 flagellum-specific ATP synthase FliI 0.65 0.58
    19 CSW01_10595 flagellar biosynthetic protein FliP no 0.58
    20 CSW01_02755 glutamyl-tRNA amidotransferase no 0.58

    Or look for negative cofitness