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  • Top cofit genes for CSW01_08580 from Vibrio cholerae E7946 ATCC 55056

    HTH-type transcriptional regulator MetR
    SEED: Transcriptional activator MetR
    KEGG: LysR family transcriptional regulator, regulator for metE and metH

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12575 transcriptional regulator LeuO 0.46 0.62
    2 CSW01_03860 protein translocase subunit SecD no 0.60
    3 CSW01_15380 hypothetical protein no 0.60
    4 CSW01_06840 amino acid ABC transporter ATP-binding protein no 0.54
    5 CSW01_07900 hypothetical protein no 0.54
    6 CSW01_05690 DUF1365 domain-containing protein 0.54 0.53
    7 CSW01_07600 transcriptional initiation protein Tat no 0.52
    8 CSW01_17020 hypothetical protein no 0.52
    9 CSW01_01750 transporter no 0.51
    10 CSW01_07650 ABC transporter permease no 0.50
    11 CSW01_09220 cyd operon protein YbgE no 0.50
    12 CSW01_00795 alkaline serine protease no 0.50
    13 CSW01_18170 inosine/guanosine kinase no 0.50
    14 CSW01_08730 phage-shock protein no 0.49
    15 CSW01_03640 bifunctional chorismate mutase/prephenate dehydrogenase 0.99 0.49
    16 CSW01_03645 PilZ domain-containing protein no 0.49
    17 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM no 0.49
    18 CSW01_10010 hypothetical protein no 0.49
    19 CSW01_04900 magnesium and cobalt efflux protein CorC 0.94 0.49
    20 CSW01_00425 universal stress protein B 0.71 0.49

    Or look for negative cofitness