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  • Top cofit genes for CSW01_08420 from Vibrio cholerae E7946 ATCC 55056

    efflux RND transporter periplasmic adaptor subunit
    SEED: Probable Co/Zn/Cd efflux system membrane fusion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05825 transcriptional regulator HexR no 0.74
    2 CSW01_12130 DUF721 domain-containing protein no 0.70
    3 CSW01_00170 thiol:disulfide interchange protein DsbA no 0.69
    4 CSW01_06225 cytidine deaminase no 0.68
    5 CSW01_09215 tol-pal system-associated acyl-CoA thioesterase no 0.68
    6 CSW01_16690 type II toxin-antitoxin system RelE/ParE family toxin no 0.64
    7 CSW01_08850 hypothetical protein no 0.64
    8 CSW01_18730 DUF406 domain-containing protein no 0.64
    9 CSW01_09720 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD no 0.63
    10 CSW01_18385 DNA-binding response regulator no 0.63
    11 CSW01_10600 flagellar biosynthetic protein FliO no 0.62
    12 CSW01_05950 anthranilate synthase component I no 0.62
    13 CSW01_15705 DUF3265 domain-containing protein no 0.62
    14 CSW01_10590 flagellar biosynthetic protein FliQ 0.36 0.62
    15 CSW01_11195 flagellar L-ring protein no 0.62
    16 CSW01_10635 flagellum-specific ATP synthase FliI no 0.62
    17 CSW01_02160 MSHA pilin protein MshC no 0.61
    18 CSW01_12080 recombinase RecF no 0.61
    19 CSW01_04535 N-acetyltransferase no 0.61
    20 CSW01_10250 c-type cytochrome biogenesis protein CcmI no 0.61

    Or look for negative cofitness