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  • Top cofit genes for CSW01_08380 from Vibrio cholerae E7946 ATCC 55056

    TIGR01621 family pseudouridine synthase
    SEED: Pseudouridine synthase
    KEGG: ribosomal large subunit pseudouridine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_01915 bacterioferritin-associated ferredoxin no 0.78
    2 CSW01_06390 thiol oxidoreductase no 0.76
    3 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.74
    4 CSW01_11190 flagellar P-ring protein no 0.73
    5 CSW01_03215 ABC transporter ATP-binding protein no 0.73
    6 CSW01_03280 16S rRNA methyltransferase 0.37 0.73
    7 CSW01_10280 heme exporter protein C no 0.72
    8 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB no 0.72
    9 CSW01_03210 iron ABC transporter permease no 0.71
    10 CSW01_06400 DUF1513 domain-containing protein no 0.71
    11 CSW01_11740 cysteine desulfurase CsdA no 0.71
    12 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase no 0.71
    13 CSW01_10500 CidA/LrgA family protein no 0.71
    14 CSW01_03205 iron ABC transporter substrate-binding protein no 0.70
    15 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase no 0.70
    16 CSW01_01485 transcriptional regulator no 0.70
    17 CSW01_05395 protease SohB no 0.70
    18 CSW01_06385 peptidase 0.34 0.70
    19 CSW01_13285 ribulose-phosphate 3-epimerase no 0.70
    20 CSW01_00510 chorismate lyase no 0.69

    Or look for negative cofitness