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  • Top cofit genes for CSW01_08305 from Vibrio cholerae E7946 ATCC 55056

    diguanylate phosphodiesterase
    SEED: Response regulator VieA
    KEGG: c-di-GMP phosphodiesterase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_10555 hypothetical protein no 0.52
    2 CSW01_05460 chitinase no 0.51
    3 CSW01_10055 PTS glucose transporter subunit IIBC no 0.51
    4 CSW01_07030 chemotaxis response regulator protein-glutamate methylesterase no 0.49
    5 CSW01_04870 ribosome silencing factor no 0.48
    6 CSW01_06115 elongation factor P-like protein YeiP no 0.46
    7 CSW01_04015 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase no 0.46
    8 CSW01_13715 pimeloyl-[acyl-carrier protein] methyl ester esterase no 0.45
    9 CSW01_18075 nucleotide sugar dehydrogenase no 0.44
    10 CSW01_12480 sigma-E factor negative regulatory protein RseA no 0.44
    11 CSW01_10795 NAD(P)H:quinone oxidoreductase no 0.44
    12 CSW01_16505 DUF645 domain-containing protein no 0.44
    13 CSW01_13875 adenosine deaminase no 0.44
    14 CSW01_05260 hypothetical protein no 0.44
    15 CSW01_05450 phosphatase no 0.44
    16 CSW01_08065 sensor histidine kinase no 0.43
    17 CSW01_04165 MFS transporter no 0.43
    18 CSW01_06250 peptide-methionine (R)-S-oxide reductase no 0.42
    19 CSW01_17535 L-serine ammonia-lyase no 0.42
    20 CSW01_17575 mycothiol reductase no 0.41

    Or look for negative cofitness