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  • Top cofit genes for CSW01_08295 from Vibrio cholerae E7946 ATCC 55056

    collagenase
    SEED: Microbial collagenase, secreted (EC 3.4.24.3)
    KEGG: microbial collagenase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase no 0.75
    2 CSW01_06380 GTP cyclohydrolase II no 0.75
    3 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB no 0.75
    4 CSW01_11555 riboflavin synthase no 0.74
    5 CSW01_11560 riboflavin biosynthesis protein RibD no 0.74
    6 CSW01_05395 protease SohB no 0.74
    7 CSW01_09655 SELO family protein no 0.73
    8 CSW01_07860 ABC transporter permease no 0.72
    9 CSW01_02530 D-erythrose-4-phosphate dehydrogenase no 0.72
    10 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase no 0.72
    11 CSW01_14505 nicotinate phosphoribosyltransferase no 0.72
    12 CSW01_11785 exonuclease V subunit gamma no 0.71
    13 CSW01_10675 flagellar protein FliS no 0.71
    14 CSW01_11210 flagellar hook protein FlgE no 0.71
    15 CSW01_09095 thiol-disulfide oxidoreductase DCC family protein no 0.71
    16 CSW01_11250 molecular chaperone no 0.71
    17 CSW01_07115 DUF2931 domain-containing protein no 0.71
    18 CSW01_05225 molybdopterin synthase sulfur carrier subunit no 0.70
    19 CSW01_11180 flagellar hook-associated protein FlgK no 0.70
    20 CSW01_02125 MSHA biogenesis protein MshM no 0.70

    Or look for negative cofitness