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  • Top cofit genes for CSW01_08105 from Vibrio cholerae E7946 ATCC 55056

    type IV pilus biogenesis/stability protein PilW
    SEED: Type IV pilus (Tfp) assembly protein PilF
    KEGG: type IV pilus assembly protein PilF

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11185 flagellar assembly peptidoglycan hydrolase FlgJ 0.42 0.64
    2 CSW01_07955 catalase 0.21 0.61
    3 CSW01_18835 acyl-CoA thioesterase no 0.59
    4 CSW01_02200 septum formation inhibitor Maf no 0.59
    5 CSW01_08365 ABC transporter permease no 0.59
    6 CSW01_17815 recombinase RecF no 0.58
    7 CSW01_10255 cytochrome c-type biogenesis protein CcmH 0.22 0.58
    8 CSW01_16665 nucleotide pyrophosphohydrolase no 0.56
    9 CSW01_06470 dehydrogenase no 0.56
    10 CSW01_07025 hypothetical protein no 0.56
    11 CSW01_10170 MarC family protein no 0.55
    12 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator 0.49 0.55
    13 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase no 0.54
    14 CSW01_18650 DsbA family protein no 0.54
    15 CSW01_02715 transcriptional antiterminator no 0.53
    16 CSW01_05130 flagellar protein MotY no 0.53
    17 CSW01_00005 hypothetical protein no 0.53
    18 CSW01_00285 DUF1488 domain-containing protein no 0.53
    19 CSW01_02125 MSHA biogenesis protein MshM no 0.53
    20 CSW01_10640 flagellar assembly protein FliH no 0.52

    Or look for negative cofitness