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  • Top cofit genes for CSW01_08080 from Vibrio cholerae E7946 ATCC 55056

    HlyD family secretion protein
    SEED: Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG
    KEGG: HlyD family secretion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03180 serine protease no 0.63
    2 CSW01_08075 TolC family protein 0.98 0.60
    3 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 0.45 0.59
    4 CSW01_12770 ABC transporter permease 0.45 0.56
    5 CSW01_12755 anti-sigma B factor antagonist no 0.56
    6 CSW01_18630 6-phosphogluconolactonase no 0.53
    7 CSW01_10055 PTS glucose transporter subunit IIBC no 0.51
    8 CSW01_17915 anaerobic glycerol-3-phosphate dehydrogenase subunit B no 0.51
    9 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD 0.42 0.49
    10 CSW01_08785 DUF4056 domain-containing protein no 0.47
    11 CSW01_07030 chemotaxis response regulator protein-glutamate methylesterase no 0.47
    12 CSW01_00850 multidrug resistance protein 0.51 0.47
    13 CSW01_10710 deferrochelatase 0.46 0.47
    14 CSW01_06740 2-methylcitrate synthase 0.81 0.46
    15 CSW01_05890 hypothetical protein no 0.46
    16 CSW01_14495 NUDIX hydrolase no 0.46
    17 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.51 0.46
    18 CSW01_07125 sodium:alanine symporter family protein no 0.46
    19 CSW01_07270 toxin-activating lysine-acyltransferase RtxC no 0.46
    20 CSW01_08085 ABC transporter permease 0.98 0.45

    Or look for negative cofitness