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  • Top cofit genes for CSW01_08075 from Vibrio cholerae E7946 ATCC 55056

    TolC family protein
    SEED: Outer membrane protein assembly factor YaeT precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 0.46 0.62
    2 CSW01_08080 HlyD family secretion protein 0.98 0.60
    3 CSW01_03180 serine protease no 0.59
    4 CSW01_02425 YggW family oxidoreductase no 0.54
    5 CSW01_03770 phosphate ABC transporter substrate-binding protein no 0.54
    6 CSW01_14575 type VI secretion system-associated FHA domain protein TagH no 0.53
    7 CSW01_04520 aminobenzoyl-glutamate transporter no 0.50
    8 CSW01_12760 phospholipid-binding protein MlaC 0.49 0.50
    9 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD 0.43 0.48
    10 CSW01_05085 hypothetical protein no 0.46
    11 CSW01_04870 ribosome silencing factor no 0.44
    12 CSW01_12770 ABC transporter permease 0.46 0.44
    13 CSW01_16120 N-acetyltransferase no 0.42
    14 CSW01_10730 ArsC family reductase no 0.42
    15 CSW01_10220 DNA topoisomerase III no 0.42
    16 CSW01_13860 nitrogen regulation protein NR(II) no 0.42
    17 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.34 0.42
    18 CSW01_08185 hydroxyneurosporene synthase no 0.41
    19 CSW01_05300 aromatic hydrocarbon degradation protein no 0.41
    20 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit 0.48 0.40

    Or look for negative cofitness