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Cofit
Protein
Homologs
Top cofit genes for CSW01_07990 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_07840
LysR family transcriptional regulator
no
0.63
2
CSW01
_17595
TIGR02808 family protein
no
0.62
3
CSW01
_18005
low-specificity L-threonine aldolase
no
0.60
4
CSW01
_17885
hypothetical protein
no
0.57
5
CSW01
_05765
imidazole glycerol phosphate synthase subunit HisH
no
0.55
6
CSW01
_18025
ACP phosphodiesterase
no
0.52
7
CSW01
_12695
lactate dehydrogenase
no
0.52
8
CSW01
_17310
3-mercaptopyruvate sulfurtransferase
no
0.52
9
CSW01
_14680
aminotransferase
no
0.51
10
CSW01
_00575
class I SAM-dependent methyltransferase
no
0.50
11
CSW01
_18705
biopolymer transporter exbD1
no
0.49
12
CSW01
_14580
type VI secretion system lipoprotein TssJ
no
0.49
13
CSW01
_09220
cyd operon protein YbgE
no
0.48
14
CSW01
_14800
transposase
no
0.48
15
CSW01
_04205
type II toxin-antitoxin system HipA family toxin
no
0.47
16
CSW01
_06750
2-methylaconitate cis-trans isomerase PrpF
no
0.47
17
CSW01
_07940
DUF2309 domain-containing protein
no
0.47
18
CSW01
_18450
hypothetical protein
no
0.47
19
CSW01
_03645
PilZ domain-containing protein
no
0.47
20
CSW01
_19210
DUF3081 domain-containing protein
no
0.47
Or look for
negative cofitness