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  • Top cofit genes for CSW01_07965 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: LysR family regulatory protein CidR

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06055 DUF3334 domain-containing protein no 0.68
    2 CSW01_13630 type II secretion protein no 0.64
    3 CSW01_04020 vibriobactin biosynthesis amide synthase VibH no 0.62
    4 CSW01_03220 phosphonomutase no 0.61
    5 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.44 0.61
    6 CSW01_06125 diguanylate phosphodiesterase no 0.61
    7 CSW01_00900 hypothetical protein no 0.61
    8 CSW01_02625 inovirus Gp2 family protein no 0.60
    9 CSW01_13690 two-component system sensor histidine kinase EnvZ no 0.59
    10 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD no 0.59
    11 CSW01_02505 SprT family protein no 0.59
    12 CSW01_12270 prepilin-type cleavage/methylation domain-containing protein no 0.59
    13 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 no 0.59
    14 CSW01_13975 acetyl-CoA C-acyltransferase FadA 0.34 0.58
    15 CSW01_03435 protease 0.51 0.58
    16 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) 0.71 0.57
    17 CSW01_07920 lipid A modification system glycine carrier protein AlmF no 0.57
    18 CSW01_07790 glycerol-3-phosphate transporter permease 0.32 0.57
    19 CSW01_07875 cytochrome BD ubiquinol oxidase subunit II 0.32 0.57
    20 CSW01_06715 tripartite tricarboxylate transporter permease no 0.57

    Or look for negative cofitness