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  • Top cofit genes for CSW01_07930 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Hydrogen peroxide-inducible genes activator
    KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02690 DUF2787 domain-containing protein no 0.59
    2 CSW01_07230 cytochrome-c oxidase, cbb3-type subunit I no 0.48
    3 CSW01_10540 NAD(P)H-dependent oxidoreductase no 0.48
    4 CSW01_05400 cysteine synthase no 0.48
    5 CSW01_00985 integrase no 0.48
    6 CSW01_13305 shikimate kinase no 0.44
    7 CSW01_18440 long-chain fatty acid transporter no 0.44
    8 CSW01_07560 DUF4442 domain-containing protein no 0.44
    9 CSW01_06485 PTS lactose/cellobiose transporter subunit IIA no 0.44
    10 CSW01_19180 cysteine methyltransferase no 0.43
    11 CSW01_04545 DUF3549 domain-containing protein no 0.42
    12 CSW01_06895 diguanylate cyclase no 0.42
    13 CSW01_17365 DNA mismatch repair protein MutT no 0.41
    14 CSW01_12780 hypothetical protein no 0.41
    15 CSW01_16285 acetyltransferase no 0.41
    16 CSW01_06745 Fe/S-dependent 2-methylisocitrate dehydratase AcnD no 0.41
    17 CSW01_05645 biotin synthase no 0.40
    18 CSW01_02305 hypothetical protein no 0.40
    19 CSW01_18835 acyl-CoA thioesterase no 0.40
    20 CSW01_17570 ferredoxin-type protein NapF no 0.40

    Or look for negative cofitness