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  • Top cofit genes for CSW01_07825 from Vibrio cholerae E7946 ATCC 55056

    LacI family transcriptional regulator
    SEED: Transcriptional regulator, LacI family
    KEGG: LacI family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03265 peptide ABC transporter substrate-binding protein no 0.54
    2 CSW01_02390 tRNA-Thr no 0.49
    3 CSW01_11415 phenolic acid decarboxylase no 0.48
    4 CSW01_13380 N-acetyl-gamma-glutamyl-phosphate reductase 0.44 0.47
    5 CSW01_09080 transcriptional regulator no 0.46
    6 CSW01_08410 AcrB/AcrD/AcrF family protein no 0.45
    7 CSW01_04050 LysR family transcriptional regulator no 0.44
    8 CSW01_18575 amidohydrolase no 0.44
    9 CSW01_17625 iron ABC transporter permease no 0.44
    10 CSW01_16260 prevent-host-death family protein no 0.44
    11 CSW01_06610 30S ribosomal protein S5 alanine N-acetyltransferase no 0.44
    12 CSW01_17470 DUF3069 domain-containing protein no 0.43
    13 CSW01_02815 tRNA pseudouridine(13) synthase TruD no 0.43
    14 CSW01_07685 DUF2960 domain-containing protein no 0.43
    15 CSW01_05890 hypothetical protein no 0.43
    16 CSW01_18215 N-acetylglucosamine-binding protein GbpA no 0.43
    17 CSW01_08340 ABC transporter permease no 0.43
    18 CSW01_07355 DNA-binding protein no 0.42
    19 CSW01_01100 PTS N-acetylmuramic acid EIIBC component 0.19 0.42
    20 CSW01_16405 hemagglutinin no 0.42

    Or look for negative cofitness