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  • Top cofit genes for CSW01_07800 from Vibrio cholerae E7946 ATCC 55056

    sn-glycerol-3-phosphate import ATP-binding protein UgpC
    SEED: Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3)
    KEGG: sn-glycerol 3-phosphate transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18530 hypothetical protein no 0.66
    2 CSW01_04040 ABC transporter ATP-binding protein no 0.66
    3 CSW01_05455 MFS transporter no 0.66
    4 CSW01_00425 universal stress protein B 0.30 0.65
    5 CSW01_06880 GGDEF domain-containing protein no 0.63
    6 CSW01_00595 heme biosynthesis protein HemY 0.29 0.63
    7 CSW01_04150 RNA methyltransferase no 0.62
    8 CSW01_11780 exodeoxyribonuclease V subunit beta 0.50 0.61
    9 CSW01_05960 PHP domain-containing protein no 0.60
    10 CSW01_07915 glycine--lipid A transferase AlmG no 0.60
    11 CSW01_02755 glutamyl-tRNA amidotransferase no 0.60
    12 CSW01_03880 HTH-type transcriptional regulator IscR 0.48 0.59
    13 CSW01_02100 RNase E specificity factor CsrD 0.36 0.59
    14 CSW01_06785 FAA hydrolase family protein no 0.58
    15 CSW01_16825 1-phosphofructokinase no 0.58
    16 CSW01_08470 DUF2927 domain-containing protein no 0.57
    17 CSW01_16855 CAI-1 autoinducer synthase no 0.57
    18 CSW01_01555 ATP-dependent RNA helicase RhlB 0.58 0.56
    19 CSW01_05925 tryptophan synthase subunit alpha no 0.56
    20 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase no 0.56

    Or look for negative cofitness