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  • Top cofit genes for CSW01_07715 from Vibrio cholerae E7946 ATCC 55056

    lipoprotein NlpC
    SEED: L-alanyl-gamma-D-glutamyl-L-diamino acid endopeptidase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07685 DUF2960 domain-containing protein no 0.55
    2 CSW01_05000 short-chain dehydrogenase 0.35 0.55
    3 CSW01_00370 LysR family transcriptional regulator no 0.48
    4 CSW01_14870 methyl-accepting chemotaxis protein no 0.46
    5 CSW01_17020 hypothetical protein no 0.46
    6 CSW01_07750 hypothetical protein no 0.45
    7 CSW01_15730 VOC family protein no 0.45
    8 CSW01_02090 helix-turn-helix transcriptional regulator no 0.44
    9 CSW01_18915 DUF3612 domain-containing protein no 0.44
    10 CSW01_09390 SpoVR family protein 0.61 0.44
    11 CSW01_08675 DUF2007 domain-containing protein no 0.44
    12 CSW01_04605 LOG family protein no 0.43
    13 CSW01_00580 GTPase-activating protein no 0.42
    14 CSW01_04445 hypothetical protein no 0.41
    15 CSW01_06820 ribosomal RNA large subunit methyltransferase I no 0.41
    16 CSW01_00390 GGDEF domain-containing protein no 0.41
    17 CSW01_11420 cytochrome C biogenesis protein CcsB no 0.41
    18 CSW01_03825 malate synthase A 0.35 0.40
    19 CSW01_18870 transcriptional regulator no 0.40
    20 CSW01_13840 translational GTPase TypA no 0.40

    Or look for negative cofitness