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  • Top cofit genes for CSW01_07635 from Vibrio cholerae E7946 ATCC 55056

    two-component sensor histidine kinase
    SEED: Signal transduction histidine kinase
    KEGG: two-component system, NtrC family, sensor kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO no 0.67
    2 CSW01_08885 hypothetical protein no 0.60
    3 CSW01_05020 regulatory protein ToxS no 0.55
    4 CSW01_07850 efflux RND transporter periplasmic adaptor subunit no 0.55
    5 CSW01_01025 LysE family translocator no 0.55
    6 CSW01_11615 deacylase no 0.54
    7 CSW01_07920 lipid A modification system glycine carrier protein AlmF no 0.54
    8 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase no 0.54
    9 CSW01_08860 DUF262 domain-containing protein no 0.52
    10 CSW01_01080 Fe(3+)-hydroxamate ABC transporter permease FhuB no 0.51
    11 CSW01_06945 hypothetical protein no 0.50
    12 CSW01_07965 LysR family transcriptional regulator no 0.50
    13 CSW01_19095 DUF445 domain-containing protein no 0.49
    14 CSW01_03435 protease 0.36 0.49
    15 CSW01_04195 class I SAM-dependent methyltransferase no 0.49
    16 CSW01_01365 MBL fold hydrolase no 0.48
    17 CSW01_01340 RfbT protein no 0.48
    18 CSW01_16800 anaerobic ribonucleoside-triphosphate reductase 0.45 0.47
    19 CSW01_18215 N-acetylglucosamine-binding protein GbpA no 0.47
    20 CSW01_05465 CPBP family intramembrane metalloprotease no 0.47

    Or look for negative cofitness