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  • Top cofit genes for CSW01_07480 from Vibrio cholerae E7946 ATCC 55056

    ribosomal RNA large subunit methyltransferase K/L
    SEED: 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-)
    KEGG: ribosomal RNA large subunit methyltransferase L

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13960 potassium uptake protein TrkH no 0.73
    2 CSW01_14510 oxidoreductase no 0.72
    3 CSW01_05280 uridine kinase no 0.71
    4 CSW01_01355 UDP-glucose 4-epimerase 0.47 0.71
    5 CSW01_04425 general secretion pathway protein GspH no 0.70
    6 CSW01_18205 dehydratase no 0.69
    7 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD no 0.69
    8 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.30 0.69
    9 CSW01_04815 YitT family protein no 0.69
    10 CSW01_00215 potassium uptake protein TrkH no 0.69
    11 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase 0.64 0.68
    12 CSW01_10390 ferrous iron transport protein A no 0.68
    13 CSW01_03470 peptide chain release factor 3 0.50 0.68
    14 CSW01_14465 EamA/RhaT family transporter 0.37 0.68
    15 CSW01_05530 two-component system response regulator no 0.68
    16 CSW01_01300 sugar ABC transporter 0.37 0.68
    17 CSW01_08465 ABC transporter ATP-binding protein no 0.68
    18 CSW01_06925 hypothetical protein no 0.68
    19 CSW01_08445 ABC transporter substrate-binding protein no 0.67
    20 CSW01_01350 polysaccharide biosynthesis protein 0.63 0.67

    Or look for negative cofitness