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  • Top cofit genes for CSW01_07180 from Vibrio cholerae E7946 ATCC 55056

    tRNA 2-thiocytidine(32) synthetase TtcA
    SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
    KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12200 ribosomal RNA small subunit methyltransferase H no 0.63
    2 CSW01_13515 HslU--HslV peptidase proteolytic subunit 0.20 0.63
    3 CSW01_05235 GGDEF domain-containing protein no 0.62
    4 CSW01_15700 hypothetical protein no 0.62
    5 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator 0.42 0.61
    6 CSW01_02560 chromosome initiation inhibitor 0.16 0.61
    7 CSW01_06735 methylisocitrate lyase 0.43 0.61
    8 CSW01_07135 chromosome partitioning protein ParA no 0.61
    9 CSW01_12885 fructose 1,6-bisphosphatase 0.29 0.61
    10 CSW01_10285 heme exporter protein CcmB no 0.60
    11 CSW01_00380 hypothetical protein no 0.60
    12 CSW01_17420 transcriptional regulator 0.55 0.60
    13 CSW01_10405 Mn2+/Zn2+ABC transporter ATP-binding protein 0.40 0.59
    14 CSW01_06280 succinylglutamate desuccinylase 0.26 0.59
    15 CSW01_02230 ribonuclease E inhibitor RraB 0.63 0.59
    16 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.61 0.58
    17 CSW01_19125 branched-chain amino acid ABC transporter no 0.58
    18 CSW01_17275 large conductance mechanosensitive channel protein MscL no 0.58
    19 CSW01_11190 flagellar P-ring protein 0.39 0.58
    20 CSW01_15340 serine hydroxymethyltransferase no 0.58

    Or look for negative cofitness