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  • Top cofit genes for CSW01_07140 from Vibrio cholerae E7946 ATCC 55056

    spermidine/putrescine ABC transporter substrate-binding protein
    SEED: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)
    KEGG: spermidine/putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19005 amino acid ABC transporter substrate-binding protein no 0.48
    2 CSW01_09670 bifunctional diguanylate cyclase/phosphodiesterase no 0.47
    3 CSW01_19600 hypothetical protein no 0.46
    4 CSW01_10810 uracil permease 0.45 0.45
    5 CSW01_15990 hypothetical protein no 0.44
    6 CSW01_16260 prevent-host-death family protein no 0.44
    7 CSW01_03265 peptide ABC transporter substrate-binding protein no 0.44
    8 CSW01_19605 short chain dehydrogenase no 0.42
    9 CSW01_08545 YdcF family protein no 0.41
    10 CSW01_07825 LacI family transcriptional regulator 0.52 0.41
    11 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.86 0.41
    12 CSW01_16560 toxin HigB-2 no 0.40
    13 CSW01_06620 EamA family transporter no 0.40
    14 CSW01_15375 hypothetical protein no 0.40
    15 CSW01_15880 hypothetical protein no 0.40
    16 CSW01_09170 histidine kinase no 0.39
    17 CSW01_03500 sigma-54-dependent Fis family transcriptional regulator no 0.39
    18 CSW01_10705 flagellin E no 0.38
    19 CSW01_00295 hypothetical protein no 0.38
    20 CSW01_13455 phaC PHA synthase no 0.38

    Or look for negative cofitness