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  • Top cofit genes for CSW01_07090 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system tube protein Hcp
    KEGG: type VI secretion system secreted protein Hcp

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19470 helix-turn-helix transcriptional regulator no 0.56
    2 CSW01_16865 ClC family H(+)/Cl(-) exchange transporter no 0.56
    3 CSW01_12075 RNA-directed DNA polymerase no 0.55
    4 CSW01_03880 HTH-type transcriptional regulator IscR no 0.54
    5 CSW01_19070 LysR family transcriptional regulator no 0.53
    6 CSW01_03240 chitobiase no 0.53
    7 CSW01_15585 DUF645 domain-containing protein no 0.53
    8 CSW01_00425 universal stress protein B no 0.53
    9 CSW01_18530 hypothetical protein no 0.52
    10 CSW01_16130 acetyltransferase no 0.51
    11 CSW01_13845 hypothetical protein no 0.51
    12 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP no 0.50
    13 CSW01_18240 mechanosensitive ion channel protein no 0.50
    14 CSW01_02435 DUF4426 domain-containing protein no 0.50
    15 CSW01_18970 DUF2850 domain-containing protein no 0.50
    16 CSW01_13180 isoaspartyl peptidase/L-asparaginase no 0.49
    17 CSW01_18725 TetR/AcrR family transcriptional regulator no 0.49
    18 CSW01_18310 hypothetical protein no 0.48
    19 CSW01_13670 DNA-directed RNA polymerase subunit omega no 0.48
    20 CSW01_11970 homoserine kinase no 0.48

    Or look for negative cofitness