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  • Top cofit genes for CSW01_06895 from Vibrio cholerae E7946 ATCC 55056

    diguanylate cyclase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07085 carboxypeptidase M32 no 0.72
    2 CSW01_10600 flagellar biosynthetic protein FliO no 0.67
    3 CSW01_00700 DNA starvation/stationary phase protection protein no 0.67
    4 CSW01_02530 D-erythrose-4-phosphate dehydrogenase no 0.65
    5 CSW01_08055 amino acid ABC transporter substrate-binding protein no 0.65
    6 CSW01_12590 TetR/AcrR family transcriptional regulator no 0.64
    7 CSW01_05455 MFS transporter no 0.64
    8 CSW01_04210 hypothetical protein no 0.63
    9 CSW01_07135 chromosome partitioning protein ParA no 0.62
    10 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator 0.25 0.62
    11 CSW01_16690 type II toxin-antitoxin system RelE/ParE family toxin no 0.62
    12 CSW01_10170 MarC family protein no 0.62
    13 CSW01_07175 DUF2987 domain-containing protein no 0.62
    14 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG no 0.62
    15 CSW01_12080 recombinase RecF no 0.62
    16 CSW01_02155 MSHA pilin protein MshA no 0.61
    17 CSW01_19620 delta-VPH no 0.61
    18 CSW01_12050 adenosylcobinamide-phosphate synthase no 0.61
    19 CSW01_06200 phosphoribosylglycinamide formyltransferase no 0.61
    20 CSW01_11225 flagellar basal body rod protein FlgB no 0.61

    Or look for negative cofitness