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  • Top cofit genes for CSW01_06870 from Vibrio cholerae E7946 ATCC 55056

    7-carboxy-7-deazaguanine synthase QueE
    SEED: Queuosine Biosynthesis QueE Radical SAM
    KEGG: queuosine biosynthesis protein QueE

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06845 amino acid ABC transporter permease 0.66 0.48
    2 CSW01_01105 hypothetical protein no 0.48
    3 CSW01_03995 hypothetical protein 0.33 0.48
    4 CSW01_01920 bacterioferritin 0.44 0.48
    5 CSW01_13640 DNA-binding response regulator no 0.46
    6 CSW01_07990 GGDEF domain-containing protein no 0.45
    7 CSW01_10495 LrgB family protein no 0.45
    8 CSW01_05420 hypothetical protein no 0.44
    9 CSW01_18600 PepSY domain-containing protein 0.33 0.44
    10 CSW01_16795 nucleotide pyrophosphatase no 0.42
    11 CSW01_07940 DUF2309 domain-containing protein no 0.41
    12 CSW01_08580 HTH-type transcriptional regulator MetR 0.38 0.41
    13 CSW01_08440 phage shock protein operon transcriptional activator no 0.40
    14 CSW01_17650 beta-ketoacyl-ACP reductase 0.52 0.40
    15 CSW01_16195 DUF645 domain-containing protein no 0.40
    16 CSW01_15825 hypothetical protein no 0.40
    17 CSW01_08745 TetR/AcrR family transcriptional regulator 0.34 0.40
    18 CSW01_03485 branched-chain amino acid transport system II carrier protein 0.28 0.39
    19 CSW01_13320 fimbrial protein no 0.39
    20 CSW01_04310 pilus assembly protein no 0.39

    Or look for negative cofitness