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  • Top cofit genes for CSW01_06850 from Vibrio cholerae E7946 ATCC 55056

    amino acid ABC transporter permease
    SEED: Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)
    KEGG: general L-amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05475 AraC family transcriptional regulator no 0.53
    2 CSW01_03190 hypothetical protein no 0.53
    3 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.31 0.52
    4 CSW01_03170 ATP-dependent helicase HrpB no 0.47
    5 CSW01_12040 DUF1499 domain-containing protein 0.47 0.46
    6 CSW01_17530 anaerobic C4-dicarboxylate transporter DcuC no 0.46
    7 CSW01_17825 hypothetical protein no 0.46
    8 CSW01_03990 chitinase no 0.45
    9 CSW01_05465 CPBP family intramembrane metalloprotease no 0.45
    10 CSW01_11080 transcriptional regulator no 0.44
    11 CSW01_01455 peptidase no 0.44
    12 CSW01_19095 DUF445 domain-containing protein no 0.44
    13 CSW01_04765 hypothetical protein no 0.44
    14 CSW01_11065 terminase no 0.43
    15 CSW01_10380 iron transporter FeoC no 0.43
    16 CSW01_01025 LysE family translocator 0.27 0.42
    17 CSW01_02860 sulfate ABC transporter permease subunit CysW 0.42 0.42
    18 CSW01_03255 ABC transporter permease no 0.42
    19 CSW01_09635 sigma-54-dependent Fis family transcriptional regulator no 0.41
    20 CSW01_13985 Bcr/CflA family drug resistance efflux transporter no 0.41

    Or look for negative cofitness