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Cofit
Protein
Homologs
Top cofit genes for CSW01_06815 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_10770
methyl-accepting chemotaxis protein
no
0.62
2
CSW01
_06310
transcriptional regulator
no
0.60
3
CSW01
_15310
exoribonuclease R
no
0.59
4
CSW01
_06435
C4-dicarboxylate ABC transporter
no
0.59
5
CSW01
_11875
PilZ domain-containing protein
no
0.57
6
CSW01
_18410
ABC transporter ATP-binding protein
no
0.57
7
CSW01
_06730
GntR family transcriptional regulator
no
0.57
8
CSW01
_14340
S9 family peptidase
no
0.56
9
CSW01
_13695
two-component system response regulator OmpR
no
0.56
10
CSW01
_18265
aspartate kinase
no
0.55
11
CSW01
_02855
sulfate/thiosulfate ABC transporter permease CysT
no
0.55
12
CSW01
_06865
Cof-type HAD-IIB family hydrolase
no
0.55
13
CSW01
_08540
NAD(P)-dependent oxidoreductase
no
0.54
14
CSW01
_07075
MFS transporter
no
0.54
15
CSW01
_04825
hypothetical protein
no
0.54
16
CSW01
_12330
ADP-ribose diphosphatase
no
0.54
17
CSW01
_18945
LysR family transcriptional regulator
no
0.54
18
CSW01
_11825
zinc transporter ZntB
no
0.54
19
CSW01
_10135
hypothetical protein
no
0.54
20
CSW01
_09930
ATP-dependent DNA helicase
no
0.54
Or look for
negative cofitness