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Cofit
Protein
Homologs
Top cofit genes for CSW01_06805 from
Vibrio cholerae E7946 ATCC 55056
peroxiredoxin
SEED: Antioxidant, AhpC/Tsa family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_08435
phage shock protein PspA
no
0.65
2
CSW01
_11825
zinc transporter ZntB
no
0.62
3
CSW01
_18235
arginine decarboxylase
no
0.61
4
CSW01
_09675
CDP-alcohol phosphatidyltransferase family protein
no
0.60
5
CSW01
_10325
protein phosphatase CheZ
0.73
0.57
6
CSW01
_08195
ABC transporter ATP-binding protein
no
0.56
7
CSW01
_11235
chemotaxis protein CheV
0.27
0.56
8
CSW01
_19490
GGDEF domain-containing protein
no
0.56
9
CSW01
_01040
protein RarD
0.53
0.55
10
CSW01
_02835
RNA polymerase sigma factor RpoS
no
0.55
11
CSW01
_19155
glutaredoxin
no
0.55
12
CSW01
_05085
hypothetical protein
no
0.55
13
CSW01
_17760
DNA helicase IV
no
0.54
14
CSW01
_19630
spermidine/putrescine ABC transporter substrate-binding protein
no
0.54
15
CSW01
_01060
ABC transporter ATP-binding protein
no
0.54
16
CSW01
_10770
methyl-accepting chemotaxis protein
no
0.54
17
CSW01
_08615
Lrp/AsnC family transcriptional regulator
no
0.54
18
CSW01
_15880
hypothetical protein
no
0.53
19
CSW01
_19320
mannitol-1-phosphate 5-dehydrogenase
no
0.53
20
CSW01
_13525
DNA-binding transcriptional regulator CytR
0.13
0.53
Or look for
negative cofitness