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  • Top cofit genes for CSW01_06725 from Vibrio cholerae E7946 ATCC 55056

    tripartite tricarboxylate transporter substrate-binding protein
    SEED: Tricarboxylate transport protein TctC
    KEGG: putative tricarboxylic transport membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02275 arginine:ornithine antiporter no 0.76
    2 CSW01_15345 XRE family transcriptional regulator no 0.72
    3 CSW01_08260 hypothetical protein no 0.67
    4 CSW01_18410 ABC transporter ATP-binding protein no 0.66
    5 CSW01_08955 transcriptional regulator 0.34 0.65
    6 CSW01_14465 EamA/RhaT family transporter no 0.64
    7 CSW01_14340 S9 family peptidase 0.34 0.64
    8 CSW01_16505 DUF645 domain-containing protein no 0.62
    9 CSW01_14510 oxidoreductase no 0.61
    10 CSW01_11710 transcriptional regulator no 0.60
    11 CSW01_04915 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.27 0.60
    12 CSW01_07835 catalase-peroxidase no 0.60
    13 CSW01_08925 sialic acid-binding protein no 0.60
    14 CSW01_15310 exoribonuclease R no 0.59
    15 CSW01_14125 1,4-alpha-glucan branching enzyme 0.35 0.59
    16 CSW01_01295 ABC transporter permease 0.40 0.59
    17 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase no 0.59
    18 CSW01_03470 peptide chain release factor 3 no 0.59
    19 CSW01_03975 exodeoxyribonuclease VII large subunit 0.44 0.59
    20 CSW01_19460 PEGA domain-containing protein no 0.58

    Or look for negative cofitness