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  • Top cofit genes for CSW01_06605 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator TyrR
    SEED: Transcriptional repressor protein TyrR
    KEGG: transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09660 hypothetical protein no 0.72
    2 CSW01_16435 DUF3265 domain-containing protein no 0.72
    3 CSW01_10360 peptidase M16 0.63 0.69
    4 CSW01_06715 tripartite tricarboxylate transporter permease 0.18 0.67
    5 CSW01_13570 fructose-bisphosphatase class II no 0.65
    6 CSW01_13690 two-component system sensor histidine kinase EnvZ 0.65 0.65
    7 CSW01_08330 hypothetical protein no 0.64
    8 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase no 0.64
    9 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD no 0.64
    10 CSW01_10325 protein phosphatase CheZ 0.57 0.64
    11 CSW01_02840 DNA mismatch repair protein MutS 0.27 0.64
    12 CSW01_09970 peptide-methionine (R)-S-oxide reductase 0.46 0.63
    13 CSW01_11235 chemotaxis protein CheV no 0.63
    14 CSW01_01295 ABC transporter permease no 0.63
    15 CSW01_15215 cytochrome b no 0.62
    16 CSW01_14475 cobinamide adenolsyltransferase no 0.62
    17 CSW01_06635 transporter no 0.62
    18 CSW01_09145 PTS fructose transporter subunit IIA no 0.62
    19 CSW01_11710 transcriptional regulator no 0.62
    20 CSW01_05250 zinc/cadmium/mercury/lead-transporting ATPase 0.70 0.62

    Or look for negative cofitness