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Cofit
Protein
Homologs
Top cofit genes for CSW01_06565 from
Vibrio cholerae E7946 ATCC 55056
L-serine ammonia-lyase
KEGG: L-serine dehydratase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_01045
DNA helicase RecQ
0.46
0.50
2
CSW01
_08885
hypothetical protein
no
0.49
3
CSW01
_06265
adenosylcobinamide-GDP ribazoletransferase
0.24
0.49
4
CSW01
_09785
septum site-determining protein MinC
0.75
0.48
5
CSW01
_09560
orotidine-5'-phosphate decarboxylase
0.68
0.46
6
CSW01
_04350
accessory colonization factor AcfD
no
0.46
7
CSW01
_07285
hypothetical protein
no
0.45
8
CSW01
_07760
energy transducer TonB
no
0.45
9
CSW01
_14380
phosphate ABC transporter, permease protein PstA
0.15
0.45
10
CSW01
_04295
toxin coregulated pilus biosynthesis protein S
no
0.44
11
CSW01
_13355
DUF3624 domain-containing protein
no
0.43
12
CSW01
_09315
exodeoxyribonuclease III
no
0.42
13
CSW01
_13340
DNA-binding transcriptional regulator OxyR
0.80
0.41
14
CSW01
_00180
cytochrome c oxidase accessory protein CcoG
0.34
0.41
15
CSW01
_15115
iron(III) ABC transporter permease
no
0.40
16
CSW01
_03045
ubiquinol-cytochrome c reductase iron-sulfur subunit
0.54
0.40
17
CSW01
_04315
TCP pilus virulence regulatory protein
no
0.40
18
CSW01
_10570
50S ribosomal protein L3 N(5)-glutamine methyltransferase
0.61
0.39
19
CSW01
_10710
deferrochelatase
0.41
0.39
20
CSW01
_06970
DUF2256 domain-containing protein
no
0.38
Or look for
negative cofitness