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  • Top cofit genes for CSW01_06500 from Vibrio cholerae E7946 ATCC 55056

    LacI family transcriptional regulator
    SEED: Transcriptional regulator, LacI family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05470 YbhB/YbcL family Raf kinase inhibitor-like protein no 0.59
    2 CSW01_01945 DUF481 domain-containing protein no 0.57
    3 CSW01_11855 HD-GYP domain-containing protein no 0.55
    4 CSW01_07580 hypothetical protein no 0.53
    5 CSW01_00390 GGDEF domain-containing protein no 0.53
    6 CSW01_00705 DUF2500 domain-containing protein no 0.52
    7 CSW01_01545 hybrid sensor histidine kinase/response regulator no 0.50
    8 CSW01_12565 acetolactate synthase 3 large subunit 0.33 0.49
    9 CSW01_05920 dicarboxylate/amino acid:cation symporter no 0.48
    10 CSW01_13660 VUT family protein no 0.47
    11 CSW01_00670 hypothetical protein no 0.47
    12 CSW01_10295 DUF2802 domain-containing protein no 0.47
    13 CSW01_17160 TetR/AcrR family transcriptional regulator no 0.46
    14 CSW01_01865 hypothetical protein no 0.45
    15 CSW01_00370 LysR family transcriptional regulator no 0.45
    16 CSW01_08575 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase no 0.45
    17 CSW01_00430 NAD(P)/FAD-dependent oxidoreductase no 0.45
    18 CSW01_00525 methyl-accepting chemotaxis protein no 0.44
    19 CSW01_03775 exopolyphosphatase no 0.44
    20 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP no 0.44

    Or look for negative cofitness