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  • Top cofit genes for CSW01_06495 from Vibrio cholerae E7946 ATCC 55056

    chitooligosaccharide deacetylase
    SEED: Cellobiose phosphotransferase system YdjC-like protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19330 gfo/Idh/MocA family oxidoreductase 0.24 0.60
    2 CSW01_17960 LysR family transcriptional regulator no 0.51
    3 CSW01_03280 16S rRNA methyltransferase 0.16 0.51
    4 CSW01_15185 Cof-type HAD-IIB family hydrolase 0.14 0.50
    5 CSW01_08400 cystathionine beta-lyase 0.53 0.50
    6 CSW01_00835 HTH-type transcriptional activator IlvY 0.58 0.49
    7 CSW01_17980 arginine ABC transporter ATP-binding protein ArtP 0.19 0.48
    8 CSW01_07650 ABC transporter permease no 0.48
    9 CSW01_17800 molybdate ABC transporter permease subunit no 0.48
    10 CSW01_17735 methylglyoxal synthase no 0.47
    11 CSW01_15155 phosphoribosyl-AMP cyclohydrolase no 0.46
    12 CSW01_11110 DNA methyltransferase no 0.46
    13 CSW01_05675 nuclear transport factor 2 family protein no 0.45
    14 CSW01_07900 hypothetical protein no 0.45
    15 CSW01_18135 Rha family transcriptional regulator no 0.44
    16 CSW01_18865 spermidine acetyltransferase no 0.44
    17 CSW01_12495 L-aspartate oxidase 0.58 0.44
    18 CSW01_00110 hypothetical protein no 0.43
    19 CSW01_18975 MFS transporter no 0.43
    20 CSW01_08290 serine protease no 0.43

    Or look for negative cofitness