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  • Top cofit genes for CSW01_06440 from Vibrio cholerae E7946 ATCC 55056

    C4-dicarboxylate ABC transporter
    SEED: TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_15155 phosphoribosyl-AMP cyclohydrolase no 0.56
    2 CSW01_15300 D-alanyl-D-alanine carboxypeptidase no 0.53
    3 CSW01_07660 molybdenum cofactor guanylyltransferase no 0.53
    4 CSW01_06935 exonuclease no 0.52
    5 CSW01_03995 hypothetical protein no 0.51
    6 CSW01_06885 hypothetical protein no 0.50
    7 CSW01_18960 quercetin 2,3-dioxygenase no 0.49
    8 CSW01_13000 peptidylprolyl isomerase no 0.49
    9 CSW01_08290 serine protease no 0.49
    10 CSW01_12120 8-oxo-dGTP diphosphatase MutT no 0.49
    11 CSW01_00365 aminopeptidase P family protein no 0.49
    12 CSW01_07570 nucleotide-binding protein 0.53 0.49
    13 CSW01_09155 PTS fructose transporter subunit IIC no 0.47
    14 CSW01_07675 amino acid ABC transporter no 0.47
    15 CSW01_08830 integrase no 0.47
    16 CSW01_07655 ABC transporter ATP-binding protein no 0.47
    17 CSW01_06000 GGDEF domain-containing protein no 0.46
    18 CSW01_07520 RNA chaperone ProQ no 0.46
    19 CSW01_15185 Cof-type HAD-IIB family hydrolase no 0.44
    20 CSW01_16940 LysR family transcriptional regulator no 0.44

    Or look for negative cofitness