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  • Top cofit genes for CSW01_06435 from Vibrio cholerae E7946 ATCC 55056

    C4-dicarboxylate ABC transporter
    SEED: TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03260 ABC transporter permease no 0.64
    2 CSW01_06975 LysR family transcriptional regulator no 0.61
    3 CSW01_11700 hypothetical protein no 0.60
    4 CSW01_10770 methyl-accepting chemotaxis protein no 0.60
    5 CSW01_05180 tRNA-Asn no 0.60
    6 CSW01_14475 cobinamide adenolsyltransferase no 0.59
    7 CSW01_09930 ATP-dependent DNA helicase no 0.59
    8 CSW01_06815 GGDEF domain-containing protein no 0.59
    9 CSW01_04420 prepilin-type cleavage/methylation domain-containing protein no 0.58
    10 CSW01_08815 AcrB/AcrD/AcrF family protein 0.25 0.58
    11 CSW01_19575 ABC transporter permease no 0.58
    12 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase no 0.58
    13 CSW01_04825 hypothetical protein no 0.57
    14 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 no 0.57
    15 CSW01_13325 pilus assembly protein PilN no 0.57
    16 CSW01_10765 thioredoxin-dependent thiol peroxidase no 0.56
    17 CSW01_06865 Cof-type HAD-IIB family hydrolase 0.32 0.56
    18 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.55
    19 CSW01_19030 L-lactate permease no 0.55
    20 CSW01_11825 zinc transporter ZntB no 0.55

    Or look for negative cofitness