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Cofit
Protein
Homologs
Top cofit genes for CSW01_06405 from
Vibrio cholerae E7946 ATCC 55056
murein L,D-transpeptidase
SEED: L,D-transpeptidase YcbB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_11705
MFS transporter
0.50
0.70
2
CSW01
_02500
deoxyribonuclease
0.78
0.69
3
CSW01
_07695
N-acetylglucosamine kinase
no
0.54
4
CSW01
_13505
1,4-dihydroxy-2-naphthoate polyprenyltransferase
no
0.53
5
CSW01
_14325
peptidase
0.62
0.51
6
CSW01
_00075
transcription elongation factor GreAB
no
0.51
7
CSW01
_01435
transcriptional regulator CadC
no
0.50
8
CSW01
_01445
lysine decarboxylase
no
0.49
9
CSW01
_09350
formate C-acetyltransferase
no
0.49
10
CSW01
_12875
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
0.66
0.48
11
CSW01
_09365
pyruvate formate lyase 1-activating protein
0.54
0.48
12
CSW01
_17530
anaerobic C4-dicarboxylate transporter DcuC
no
0.47
13
CSW01
_01110
YicC family protein
0.82
0.47
14
CSW01
_01440
lysine:cadaverine antiporter
no
0.46
15
CSW01
_04100
oxaloacetate decarboxylase subunit alpha
no
0.46
16
CSW01
_07190
transcriptional regulator FNR
0.48
0.46
17
CSW01
_12815
RNA polymerase sigma-54 factor
0.53
0.45
18
CSW01
_15375
hypothetical protein
no
0.44
19
CSW01
_03950
hypothetical protein
0.52
0.44
20
CSW01
_03330
transcription elongation factor GreA
no
0.44
Or look for
negative cofitness