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  • Top cofit genes for CSW01_06405 from Vibrio cholerae E7946 ATCC 55056

    murein L,D-transpeptidase
    SEED: L,D-transpeptidase YcbB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11705 MFS transporter 0.32 0.70
    2 CSW01_02500 deoxyribonuclease 0.78 0.69
    3 CSW01_07695 N-acetylglucosamine kinase no 0.54
    4 CSW01_13505 1,4-dihydroxy-2-naphthoate polyprenyltransferase no 0.53
    5 CSW01_14325 peptidase 0.46 0.51
    6 CSW01_00075 transcription elongation factor GreAB no 0.51
    7 CSW01_01435 transcriptional regulator CadC 0.57 0.50
    8 CSW01_01445 lysine decarboxylase no 0.49
    9 CSW01_09350 formate C-acetyltransferase no 0.49
    10 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.53 0.48
    11 CSW01_09365 pyruvate formate lyase 1-activating protein 0.54 0.48
    12 CSW01_17530 anaerobic C4-dicarboxylate transporter DcuC no 0.47
    13 CSW01_01110 YicC family protein 0.82 0.47
    14 CSW01_01440 lysine:cadaverine antiporter no 0.46
    15 CSW01_04100 oxaloacetate decarboxylase subunit alpha no 0.46
    16 CSW01_07190 transcriptional regulator FNR 0.48 0.46
    17 CSW01_12815 RNA polymerase sigma-54 factor 0.53 0.45
    18 CSW01_15375 hypothetical protein no 0.44
    19 CSW01_03950 hypothetical protein 0.65 0.44
    20 CSW01_03330 transcription elongation factor GreA 0.53 0.44

    Or look for negative cofitness