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  • Top cofit genes for CSW01_06320 from Vibrio cholerae E7946 ATCC 55056

    competence/damage-inducible protein A
    SEED: Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type E
    KEGG: competence/damage-inducible protein CinA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04285 toxin coregulated pilus biosynthesis protein R no 0.57
    2 CSW01_09090 NYN domain-containing protein no 0.54
    3 CSW01_02485 YqgE/AlgH family protein 0.38 0.53
    4 CSW01_19195 LysR family transcriptional regulator 0.40 0.50
    5 CSW01_00285 DUF1488 domain-containing protein no 0.50
    6 CSW01_05045 dipeptide/tripeptide permease DtpA no 0.49
    7 CSW01_15535 NUDIX hydrolase no 0.48
    8 CSW01_16270 DUF3709 domain-containing protein no 0.46
    9 CSW01_13650 DUF4212 domain-containing protein no 0.45
    10 CSW01_14440 redox-sensitive transcriptional activator SoxR no 0.44
    11 CSW01_11330 DNA endonuclease SmrA no 0.43
    12 CSW01_07755 hypothetical protein no 0.43
    13 CSW01_00775 HTH-type transcriptional repressor FabR 0.38 0.43
    14 CSW01_04765 hypothetical protein no 0.43
    15 CSW01_19010 methyl-accepting chemotaxis protein no 0.42
    16 CSW01_01035 gamma-glutamyltransferase 0.46 0.42
    17 CSW01_18745 AraC family transcriptional regulator no 0.42
    18 CSW01_14775 Na+/H+ antiporter subunit D no 0.42
    19 CSW01_04700 low molecular weight phosphotyrosine protein phosphatase no 0.42
    20 CSW01_18525 integrase no 0.41

    Or look for negative cofitness