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  • Top cofit genes for CSW01_06315 from Vibrio cholerae E7946 ATCC 55056

    DUF3943 domain-containing protein
    SEED: Ubiquitin-protein ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02830 murein hydrolase activator NlpD no 0.73
    2 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit no 0.72
    3 CSW01_11870 DNA repair protein RadA no 0.70
    4 CSW01_12770 ABC transporter permease no 0.66
    5 CSW01_05630 replication-associated recombination protein A no 0.65
    6 CSW01_04570 exodeoxyribonuclease 7 small subunit no 0.65
    7 CSW01_01530 cyclic nucleotide-binding protein no 0.63
    8 CSW01_12950 adenylyl-sulfate kinase no 0.63
    9 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit no 0.63
    10 CSW01_09245 Holliday junction branch migration protein RuvA no 0.62
    11 CSW01_02855 sulfate/thiosulfate ABC transporter permease CysT no 0.62
    12 CSW01_09240 Holliday junction branch migration DNA helicase RuvB no 0.60
    13 CSW01_18595 VOC family protein no 0.60
    14 CSW01_03175 penicillin-binding protein 1B no 0.58
    15 CSW01_01215 capsular biosynthesis protein no 0.57
    16 CSW01_00850 multidrug resistance protein no 0.57
    17 CSW01_12975 Crp/Fnr family transcriptional regulator no 0.57
    18 CSW01_12330 ADP-ribose diphosphatase no 0.57
    19 CSW01_12335 outer membrane protein TolC no 0.57
    20 CSW01_10390 ferrous iron transport protein A no 0.57

    Or look for negative cofitness