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  • Top cofit genes for CSW01_06285 from Vibrio cholerae E7946 ATCC 55056

    vitamin B12 ABC transporter permease BtuC
    SEED: Vitamin B12 ABC transporter, permease component BtuC
    KEGG: vitamin B12 transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04555 tRNA pseudouridine(65) synthase TruC 0.22 0.61
    2 CSW01_13280 phosphoglycolate phosphatase 0.37 0.56
    3 CSW01_17965 arginine transporter permease subunit ArtM 0.18 0.55
    4 CSW01_04720 glycosyl transferase family 1 no 0.47
    5 CSW01_02845 cysteine synthase CysM no 0.45
    6 CSW01_05460 chitinase no 0.43
    7 CSW01_06375 hypothetical protein no 0.43
    8 CSW01_08160 carboxynorspermidine decarboxylase no 0.43
    9 CSW01_16895 DNA-binding response regulator no 0.42
    10 CSW01_05370 YbaB/EbfC family nucleoid-associated protein no 0.42
    11 CSW01_18375 GGDEF domain-containing protein no 0.42
    12 CSW01_07505 aminopeptidase N no 0.42
    13 CSW01_15775 DUF1349 domain-containing protein no 0.42
    14 CSW01_16570 N-acetyltransferase no 0.41
    15 CSW01_00580 GTPase-activating protein no 0.41
    16 CSW01_08675 DUF2007 domain-containing protein no 0.41
    17 CSW01_08785 DUF4056 domain-containing protein no 0.41
    18 CSW01_04795 polysaccharide biosynthesis/export family protein no 0.40
    19 CSW01_14940 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase no 0.40
    20 CSW01_08745 TetR/AcrR family transcriptional regulator no 0.40

    Or look for negative cofitness