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  • Top cofit genes for CSW01_06100 from Vibrio cholerae E7946 ATCC 55056

    histidine utilization repressor
    SEED: Histidine utilization repressor
    KEGG: GntR family transcriptional regulator, histidine utilization repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05495 histidine kinase no 0.55
    2 CSW01_08415 efflux RND transporter periplasmic adaptor subunit no 0.51
    3 CSW01_17230 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein no 0.50
    4 CSW01_03550 transcriptional activator protein NhaR no 0.49
    5 CSW01_06545 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 0.47 0.48
    6 CSW01_14795 universal stress protein no 0.47
    7 CSW01_17710 phosphoglycerate transport regulatory protein PgtC no 0.47
    8 CSW01_02390 tRNA-Thr no 0.46
    9 CSW01_06120 nucleotidyltransferase no 0.44
    10 CSW01_14825 GGDEF domain-containing protein no 0.44
    11 CSW01_17280 formate--tetrahydrofolate ligase no 0.44
    12 CSW01_08385 sodium-dependent transporter no 0.43
    13 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA no 0.43
    14 CSW01_02090 helix-turn-helix transcriptional regulator no 0.43
    15 CSW01_12430 hypothetical protein no 0.43
    16 CSW01_18865 spermidine acetyltransferase 0.48 0.43
    17 CSW01_18100 sensor domain-containing phosphodiesterase no 0.43
    18 CSW01_06225 cytidine deaminase no 0.42
    19 CSW01_07855 TolC family protein no 0.42
    20 CSW01_16120 N-acetyltransferase no 0.42

    Or look for negative cofitness