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  • Top cofit genes for CSW01_05965 from Vibrio cholerae E7946 ATCC 55056

    threonylcarbamoyl-AMP synthase
    SEED: Hypothetical YciO protein, TsaC/YrdC paralog
    KEGG: putative translation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02645 IS3 family transposase no 0.54
    2 CSW01_07770 MotA/TolQ/ExbB proton channel family protein no 0.53
    3 CSW01_06760 N-acetyltransferase no 0.52
    4 CSW01_02730 diguanylate phosphodiesterase no 0.51
    5 CSW01_05450 phosphatase no 0.51
    6 CSW01_19420 coniferyl aldehyde dehydrogenase no 0.48
    7 CSW01_13375 acetylglutamate kinase no 0.47
    8 CSW01_11550 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II no 0.46
    9 CSW01_13555 bifunctional aspartate kinase/homoserine dehydrogenase II 0.40 0.46
    10 CSW01_14915 ribosome alternative rescue factor ArfA no 0.46
    11 CSW01_16460 acetyltransferase no 0.45
    12 CSW01_16785 hypothetical protein no 0.44
    13 CSW01_06650 DUF535 domain-containing protein 0.31 0.44
    14 CSW01_01035 gamma-glutamyltransferase no 0.44
    15 CSW01_10765 thioredoxin-dependent thiol peroxidase 0.33 0.43
    16 CSW01_07925 lipid A modification system glycine--protein ligase AlmE no 0.43
    17 CSW01_14865 MoxR family ATPase 0.39 0.42
    18 CSW01_15535 NUDIX hydrolase no 0.42
    19 CSW01_04950 sulfate transporter CysZ 0.63 0.42
    20 CSW01_19380 LysR family transcriptional regulator no 0.42

    Or look for negative cofitness