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  • Top cofit genes for CSW01_05930 from Vibrio cholerae E7946 ATCC 55056

    tryptophan synthase subunit beta
    SEED: Tryptophan synthase beta chain (EC 4.2.1.20)
    KEGG: tryptophan synthase beta chain

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06380 GTP cyclohydrolase II no 0.83
    2 CSW01_11560 riboflavin biosynthesis protein RibD no 0.83
    3 CSW01_11555 riboflavin synthase no 0.81
    4 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB no 0.79
    5 CSW01_06735 methylisocitrate lyase 0.92 0.78
    6 CSW01_07135 chromosome partitioning protein ParA no 0.77
    7 CSW01_01915 bacterioferritin-associated ferredoxin no 0.77
    8 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase 0.64 0.76
    9 CSW01_11780 exodeoxyribonuclease V subunit beta no 0.76
    10 CSW01_03410 polyribonucleotide nucleotidyltransferase 0.54 0.75
    11 CSW01_06400 DUF1513 domain-containing protein no 0.75
    12 CSW01_13285 ribulose-phosphate 3-epimerase 0.74 0.75
    13 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.74
    14 CSW01_03280 16S rRNA methyltransferase 0.73 0.74
    15 CSW01_02725 methyl-accepting chemotaxis protein no 0.73
    16 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.73
    17 CSW01_05395 protease SohB no 0.73
    18 CSW01_08310 hypothetical protein no 0.73
    19 CSW01_00560 DNA polymerase I no 0.72
    20 CSW01_11265 flagellar basal-body protein no 0.72

    Or look for negative cofitness