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  • Top cofit genes for CSW01_05895 from Vibrio cholerae E7946 ATCC 55056

    tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
    SEED: tRNA (5-methoxyuridine) 34 synthase
    KEGG: tRNA (mo5U34)-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06735 methylisocitrate lyase 0.33 0.64
    2 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator no 0.64
    3 CSW01_10290 cytochrome c biogenesis ATP-binding export protein CcmA no 0.63
    4 CSW01_07105 lipase no 0.62
    5 CSW01_17160 TetR/AcrR family transcriptional regulator 0.69 0.61
    6 CSW01_06450 histidine kinase no 0.60
    7 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.92 0.60
    8 CSW01_10265 c-type cytochrome biogenesis protein CcmF 0.48 0.60
    9 CSW01_16835 catabolite repressor/activator no 0.59
    10 CSW01_11920 NupC/NupG family nucleoside CNT transporter no 0.59
    11 CSW01_13515 HslU--HslV peptidase proteolytic subunit 0.36 0.59
    12 CSW01_12130 DUF721 domain-containing protein no 0.59
    13 CSW01_11250 molecular chaperone no 0.59
    14 CSW01_05950 anthranilate synthase component I 0.70 0.59
    15 CSW01_06785 FAA hydrolase family protein 0.84 0.59
    16 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB 0.48 0.58
    17 CSW01_05210 GTP 3',8-cyclase MoaA 0.40 0.58
    18 CSW01_05065 N-acetylglucosamine repressor 0.61 0.57
    19 CSW01_07135 chromosome partitioning protein ParA no 0.57
    20 CSW01_11145 hypothetical protein no 0.57

    Or look for negative cofitness