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Cofit
Protein
Homologs
Top cofit genes for CSW01_05860 from
Vibrio cholerae E7946 ATCC 55056
response regulator
SEED: Response regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_02485
YqgE/AlgH family protein
no
0.51
2
CSW01
_00915
nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein
no
0.51
3
CSW01
_12270
prepilin-type cleavage/methylation domain-containing protein
no
0.49
4
CSW01
_01055
hypothetical protein
no
0.47
5
CSW01
_05265
methionine--tRNA ligase
no
0.47
6
CSW01
_14605
type VI secretion system-associated protein TagO
no
0.47
7
CSW01
_06055
DUF3334 domain-containing protein
no
0.46
8
CSW01
_04120
citrate lyase ACP
no
0.45
9
CSW01
_02065
lysine-sensitive aspartokinase 3
no
0.45
10
CSW01
_15480
DUF645 domain-containing protein
no
0.44
11
CSW01
_19105
TetR/AcrR family transcriptional regulator
no
0.44
12
CSW01
_02950
sodium ion-translocating decarboxylase subunit beta
no
0.44
13
CSW01
_11090
XRE family transcriptional regulator
no
0.44
14
CSW01
_08960
DNA repair protein RadC
no
0.44
15
CSW01
_19180
cysteine methyltransferase
no
0.43
16
CSW01
_09690
acyl-CoA thioesterase
no
0.43
17
CSW01
_18085
ABC transporter
no
0.43
18
CSW01
_07095
type VI secretion system tip protein VgrG
no
0.42
19
CSW01
_05610
sensor domain-containing diguanylate cyclase
no
0.41
20
CSW01
_14925
hypothetical protein
no
0.41
Or look for
negative cofitness