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  • Top cofit genes for CSW01_05805 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent Clp protease ATP-binding subunit ClpA
    SEED: ATP-dependent Clp protease ATP-binding subunit ClpA
    KEGG: ATP-dependent Clp protease ATP-binding subunit ClpA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12815 RNA polymerase sigma-54 factor 0.98 0.58
    2 CSW01_13815 AsmA family protein no 0.58
    3 CSW01_13950 hypothetical protein no 0.55
    4 CSW01_11870 DNA repair protein RadA 0.84 0.53
    5 CSW01_05195 sigma-54-dependent Fis family transcriptional regulator no 0.50
    6 CSW01_00650 tyrosine recombinase XerC 0.67 0.49
    7 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.34 0.49
    8 CSW01_03175 penicillin-binding protein 1B 0.72 0.48
    9 CSW01_12770 ABC transporter permease 0.74 0.47
    10 CSW01_13970 fatty acid oxidation complex subunit alpha FadB 0.71 0.47
    11 CSW01_10750 outer membrane protein assembly factor BamC no 0.47
    12 CSW01_08620 chromosome partition protein MukB no 0.47
    13 CSW01_02965 insulinase family protein no 0.46
    14 CSW01_13680 DNA helicase RecG 0.93 0.45
    15 CSW01_05630 replication-associated recombination protein A 0.70 0.45
    16 CSW01_01210 LPS biosynthesis protein WavE no 0.45
    17 CSW01_12250 site-specific tyrosine recombinase XerD 0.73 0.45
    18 CSW01_06910 molecular chaperone DnaK no 0.44
    19 CSW01_06315 DUF3943 domain-containing protein no 0.44
    20 CSW01_02260 C4-dicarboxylate ABC transporter substrate-binding protein no 0.44

    Or look for negative cofitness