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  • Top cofit genes for CSW01_05785 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA pseudouridine synthase E
    SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase E

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19020 ABC transporter no 0.62
    2 CSW01_10495 LrgB family protein no 0.54
    3 CSW01_18785 DUF808 domain-containing protein 0.47 0.53
    4 CSW01_15965 DUF645 domain-containing protein no 0.52
    5 CSW01_00415 hypothetical protein no 0.50
    6 CSW01_11300 copper-exporting P-type ATPase A 0.37 0.49
    7 CSW01_04595 DUF423 domain-containing protein 0.55 0.48
    8 CSW01_09945 NADPH-dependent 2,4-dienoyl-CoA reductase 0.21 0.47
    9 CSW01_15315 carbonic anhydrase no 0.47
    10 CSW01_16845 nuclease SbcCD subunit C no 0.45
    11 CSW01_17930 thioredoxin TrxC 0.46 0.45
    12 CSW01_17560 DNA-binding response regulator no 0.45
    13 CSW01_16195 DUF645 domain-containing protein no 0.45
    14 CSW01_00555 N-acetyltransferase no 0.44
    15 CSW01_04525 DUF188 domain-containing protein no 0.44
    16 CSW01_00535 thiosulfate sulfurtransferase no 0.43
    17 CSW01_06585 fumarate hydratase no 0.43
    18 CSW01_04065 D-amino acid dehydrogenase small subunit no 0.42
    19 CSW01_13865 nitrogen regulation protein NR(I) no 0.42
    20 CSW01_15740 hypothetical protein no 0.42

    Or look for negative cofitness