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  • Top cofit genes for CSW01_05615 from Vibrio cholerae E7946 ATCC 55056

    tRNA dihydrouridine(16) synthase DusC
    SEED: tRNA-dihydrouridine synthase C (EC 1.-.-.-)
    KEGG: tRNA-dihydrouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08340 ABC transporter permease 0.60 0.53
    2 CSW01_15685 toxin no 0.51
    3 CSW01_12120 8-oxo-dGTP diphosphatase MutT no 0.51
    4 CSW01_04505 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO 0.61 0.50
    5 CSW01_06580 aminodeoxychorismate synthase component 1 0.34 0.49
    6 CSW01_09215 tol-pal system-associated acyl-CoA thioesterase no 0.48
    7 CSW01_07865 ABC transporter permease no 0.48
    8 CSW01_02780 hypothetical protein no 0.48
    9 CSW01_11930 peroxide stress protein YaaA 0.41 0.48
    10 CSW01_03450 N-acetyltransferase 0.31 0.48
    11 CSW01_05440 transcriptional regulator no 0.47
    12 CSW01_17160 TetR/AcrR family transcriptional regulator no 0.47
    13 CSW01_11090 XRE family transcriptional regulator no 0.47
    14 CSW01_17740 nicotinamidase/pyrazinamidase 0.33 0.45
    15 CSW01_16285 acetyltransferase no 0.44
    16 CSW01_10750 outer membrane protein assembly factor BamC 0.49 0.44
    17 CSW01_08780 hypothetical protein no 0.44
    18 CSW01_04940 hypothetical protein no 0.44
    19 CSW01_17850 flagellar brake protein no 0.44
    20 CSW01_09100 cryptochrome DASH no 0.43

    Or look for negative cofitness