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  • Top cofit genes for CSW01_05555 from Vibrio cholerae E7946 ATCC 55056

    oligopeptide ABC transporter permease OppC
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13250 aspartate aminotransferase family protein 0.53 0.59
    2 CSW01_12105 carbamoyl-phosphate synthase small subunit 0.56 0.56
    3 CSW01_00635 diaminopimelate decarboxylase 0.65 0.53
    4 CSW01_18950 GGDEF domain-containing protein no 0.52
    5 CSW01_07490 dihydroorotate dehydrogenase (quinone) 0.67 0.51
    6 CSW01_01525 3'-5' exonuclease no 0.50
    7 CSW01_01120 orotate phosphoribosyltransferase 0.61 0.49
    8 CSW01_12725 aspartate carbamoyltransferase 0.31 0.49
    9 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase 0.29 0.49
    10 CSW01_12100 carbamoyl-phosphate synthase large chain 0.54 0.49
    11 CSW01_02625 inovirus Gp2 family protein no 0.48
    12 CSW01_05565 ABC transporter ATP-binding protein 1.00 0.47
    13 CSW01_18760 dihydroorotase 0.57 0.46
    14 CSW01_05530 two-component system response regulator no 0.45
    15 CSW01_10190 nucleoid-associated protein 0.67 0.45
    16 CSW01_18580 protein deglycase HchA no 0.44
    17 CSW01_14295 lactate dehydrogenase no 0.42
    18 CSW01_14390 GGDEF domain-containing protein no 0.42
    19 CSW01_18660 glycerate kinase no 0.42
    20 CSW01_01430 Zn(2+)-responsive transcriptional regulator no 0.41

    Or look for negative cofitness