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  • Top cofit genes for CSW01_05550 from Vibrio cholerae E7946 ATCC 55056

    oligopeptide ABC transporter permease OppB
    SEED: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08130 LysR family transcriptional regulator no 0.73
    2 CSW01_01170 hypothetical protein no 0.66
    3 CSW01_02980 HlyC/CorC family transporter no 0.62
    4 CSW01_07060 TetR/AcrR family transcriptional regulator no 0.62
    5 CSW01_02135 MSHA biogenesis protein MshE 0.64 0.60
    6 CSW01_02115 MSHA biogenesis protein MshK no 0.59
    7 CSW01_02165 MSHA pilin protein MshD no 0.58
    8 CSW01_02120 pilus (MSHA type) biogenesis protein MshL no 0.58
    9 CSW01_13450 EF-P beta-lysylation protein EpmB no 0.58
    10 CSW01_08900 N-acetylneuraminate epimerase no 0.57
    11 CSW01_02140 type II secretion system F family protein 0.62 0.57
    12 CSW01_02180 MSHA biogenesis protein MshQ no 0.57
    13 CSW01_17675 GGDEF domain-containing protein no 0.57
    14 CSW01_00470 twin-arginine translocase subunit TatC 0.60 0.57
    15 CSW01_14990 hypothetical protein no 0.56
    16 CSW01_19365 LysR family transcriptional regulator 0.38 0.56
    17 CSW01_10285 heme exporter protein CcmB no 0.56
    18 CSW01_07085 carboxypeptidase M32 no 0.56
    19 CSW01_10170 MarC family protein 0.27 0.56
    20 CSW01_03410 polyribonucleotide nucleotidyltransferase no 0.55

    Or look for negative cofitness