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Cofit
Protein
Homologs
Top cofit genes for CSW01_05430 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: FOG: GGDEF domain
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_10390
ferrous iron transport protein A
no
0.78
2
CSW01
_08190
ABC transporter permease
no
0.77
3
CSW01
_03155
RNA polymerase-binding transcription factor DksA
no
0.77
4
CSW01
_13980
LysR family transcriptional regulator
no
0.75
5
CSW01
_00215
potassium uptake protein TrkH
no
0.75
6
CSW01
_08445
ABC transporter substrate-binding protein
no
0.75
7
CSW01
_11710
transcriptional regulator
no
0.74
8
CSW01
_01300
sugar ABC transporter
no
0.74
9
CSW01
_10360
peptidase M16
no
0.74
10
CSW01
_11270
non-ribosomal peptide synthetase
no
0.73
11
CSW01
_01265
ADP-L-glycero-D-mannoheptose-6-epimerase
no
0.73
12
CSW01
_01295
ABC transporter permease
no
0.73
13
CSW01
_10325
protein phosphatase CheZ
no
0.73
14
CSW01
_10355
phosphohistidine phosphatase SixA
no
0.73
15
CSW01
_01250
polymerase
no
0.73
16
CSW01
_01255
acyltransferase
no
0.72
17
CSW01
_06075
DUF3581 domain-containing protein
no
0.72
18
CSW01
_09515
Na+/H+ antiporter NhaB
no
0.72
19
CSW01
_01260
polysaccharide deacetylase
no
0.72
20
CSW01
_01355
UDP-glucose 4-epimerase
no
0.72
Or look for
negative cofitness