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  • Top cofit genes for CSW01_05340 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Cyn operon transcriptional activator
    KEGG: LysR family transcriptional regulator, transcriptional activator AphB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13430 succinate dehydrogenase/fumarate reductase iron-sulfur subunit no 0.86
    2 CSW01_01440 lysine:cadaverine antiporter no 0.85
    3 CSW01_01435 transcriptional regulator CadC no 0.83
    4 CSW01_01445 lysine decarboxylase no 0.82
    5 CSW01_07190 transcriptional regulator FNR 0.31 0.80
    6 CSW01_01845 protease modulator HflK 0.56 0.79
    7 CSW01_13425 fumarate reductase (quinol) flavoprotein subunit 0.37 0.79
    8 CSW01_10165 bifunctional acetaldehyde-CoA/alcohol dehydrogenase no 0.76
    9 CSW01_13505 1,4-dihydroxy-2-naphthoate polyprenyltransferase no 0.74
    10 CSW01_09350 formate C-acetyltransferase no 0.72
    11 CSW01_09365 pyruvate formate lyase 1-activating protein no 0.69
    12 CSW01_04930 phosphoenolpyruvate-protein phosphotransferase PtsI 0.58 0.65
    13 CSW01_13440 fumarate reductase subunit D no 0.64
    14 CSW01_04660 PTS trehalose transporter subunit IIBC 0.43 0.63
    15 CSW01_11935 sodium:alanine symporter family protein no 0.62
    16 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ no 0.62
    17 CSW01_09515 Na+/H+ antiporter NhaB no 0.62
    18 CSW01_01850 protease modulator HflC 0.53 0.60
    19 CSW01_03180 serine protease no 0.59
    20 CSW01_10385 Fe(2+) transporter permease subunit FeoB no 0.59

    Or look for negative cofitness