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Cofit
Protein
Homologs
Top cofit genes for CSW01_05235 from
Vibrio cholerae E7946 ATCC 55056
GGDEF domain-containing protein
SEED: GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_19125
branched-chain amino acid ABC transporter
no
0.78
2
CSW01
_02230
ribonuclease E inhibitor RraB
no
0.76
3
CSW01
_06385
peptidase
no
0.75
4
CSW01
_08285
SgrR family transcriptional regulator
no
0.74
5
CSW01
_01915
bacterioferritin-associated ferredoxin
no
0.72
6
CSW01
_12200
ribosomal RNA small subunit methyltransferase H
no
0.72
7
CSW01
_03215
ABC transporter ATP-binding protein
no
0.72
8
CSW01
_06735
methylisocitrate lyase
no
0.72
9
CSW01
_11190
flagellar P-ring protein
no
0.71
10
CSW01
_03210
iron ABC transporter permease
0.21
0.71
11
CSW01
_12265
carboxylating nicotinate-nucleotide diphosphorylase
no
0.70
12
CSW01
_10280
heme exporter protein C
no
0.70
13
CSW01
_13285
ribulose-phosphate 3-epimerase
no
0.69
14
CSW01
_06370
sugar efflux transporter SetB
no
0.69
15
CSW01
_07240
histidine kinase
no
0.69
16
CSW01
_08350
DUF1289 domain-containing protein
no
0.69
17
CSW01
_10655
flagellar hook-basal body complex protein FliE
no
0.69
18
CSW01
_09750
molybdopterin guanine dinucleotide-containing S/N-oxide reductase
no
0.68
19
CSW01
_05825
transcriptional regulator HexR
no
0.68
20
CSW01
_00170
thiol:disulfide interchange protein DsbA
no
0.68
Or look for
negative cofitness